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Recent News and Articles on the Keywords: key + intact + dna  Related to the article below (Last Update: 8/5/2008)


3 News NZ
Pragmatists know it's all about money
Stuff.co.nz, New Zealand - Aug 3, 2008
The response from the floor to Mr Key's promise to keep the scheme intact sums it up; like interest-free student loans, Working for Families ? once it's ...
Gordon Campbell on National?s economic vision Scoop.co.nz
Key denies National a Labour lookalike New Zealand Herald
all 245 news articles »

Times Online
Michael Vaughan bows out with dignity intact
Times Online, UK - Aug 4, 2008
Robert Key is the only name who springs to mind, but this would be too much a bolt from the azure. The confusion suggests that there has been little forward ...

ABC News
The Fed's flight of the doves
CNNMoney.com - Aug 4, 2008
If the Fed keeps that language intact in Tuesday's statement, that would probably be interpreted as a sign that it intends to raise rates soon. ...
Russell continues descent as market dishes up news for the bears SmallCapInvestor
all 953 news articles »
Ealham strikes at right time to keep Notts' record intact
guardian.co.uk, UK - Aug 3, 2008
Only Lance Klusener and David Sales reached double figures as Northants, batting first, were rolled for 61, Chris Wright taking both key wickets during a ...
'Deleted' Clues Help Solve Crimes
RedOrbit, TX -
But deep in the recesses of your hard drive, the file remains intact and can be found -- by someone who knows how to look. The same is true for any device ...
Andy Dent: When key staff are away, the gremlins will play
Birmingham Post, UK - Aug 4, 2008
We drum it into our clients that their data and systems need to remain secure and intact with the correct back-ups in place so if there is ever a problem ...
Indian shares flat after lower opening; metal, IT stocks down
Forbes, NY -
The US Federal Open Market Committee (FOMC) is expected to keep its key interest rates intact at its meeting Tuesday, despite the headline PCE index, ...
Kenexa Corporation Q2 2008 Earnings Call Transcript
Seeking Alpha, NY -
We believe the underlying drivers of market demand remain intact. The aging of the workforce, the climbing tenure of employees, increased globalization, ...KNXA
BluePhoenix Solutions Reports Financial Results for Q2 2008
PR Newswire (press release), NY -
The demand for data modernizations and migrations is intact and our best-of-breed tools and solutions are well-positioned for sustainable long-term success. ...BPHX - LON:CPI
Friedgen waiting for a signal
Annapolis Capital, MD - 42 minutes ago
The receiving corps returns virtually intact, led by junior Darius Heyward-Bey, who caught 51 passes last year and remains the passing game's primary ...
Source: Google News

… of a DNA double helix by an ATP-dependent protein clamp: a key step in DNA transport by type II DNA -
J Roca, JC Wang - Cell, 1992 - chembiol.com
... double helix by an ATP-dependent protein clamp: A key step in ... 1137-1148 [Summary]
[PDF] Crystal Structure of an Intact Type II DNA Topoisomerase: Insights ...

… mapping in Arabidopsis thaliana and tomato by fluorescence in situ hybridization to extended DNA -
PF Fransz, C Alonso-Blanco, TB Liharska, AJM … - The Plant Journal, 1996 - ingentaconnect.com
... Key: - Free content. - New Content. - Subscribed Content. - Free Trial Content. ... to
decondense chromatin and to generate highly extended intact DNA fibres on ...

A comparative evaluation of the synthesis of DNA-like RNA in excised and intact plant tissues. -
J Ingle, JL Key - Plant Physiology, 1965 - pubmedcentral.nih.gov
... Copyright notice. A comparative evaluation of the synthesis of DNA-like RNA in excised
and intact plant tissues. J Ingle and JL Key. This article has been cited ...

… of interleukin-6 gene expression by 17?-estradiol: inhibition of the DNA-binding activity of the … -
P Ray, SK Ghosh, DH Zhang, A Ray - FEBS Letters, 1997 - Elsevier
... standing the molecular mechanisms that control steroid regu- lation of key cytokine
genes ... HE 19, lacking the TAF-1 domain but with intact DNA-binding domain and ...

… and reliable method for PCR-based amplification of chromosomal and mitochondrial DNA from intact -
R Jesnowski, J Naehring, K Wolf - Current Genetics, 1995 - Springer
... Abslract In this paper we describe a method to amplify mitochondrial and chromosomal
DNA from yeasts by PCR using intact cells. Key words Polymerase chain ...

Sequential activation of three distinct ICE-like activities in Fas-ligated Jurkat cells -
EL Greidinger, DK Miller, TT Yamin, L Casciola- … - FEBS Letters, 1996 - Elsevier
... in apoptosis appear to be accomplished by the cleavage of key homeostatic cellular ...
results were obtained using serum AG [7] to detect intact DNA-PI?? the 160 ...

… from Bacillus amyloliquefaciens (barnase) and investigation of key residues in catalysis by site- … -
DE Mossakowska, K Nyberg, AR Fersht - Biochemistry, 1989 - pubs.acs.org
... characterize the basic kinetics and specificity of the enzyme, and, using site-directed
mutagenesis, identify key residues involved ... Recombinant DNA Techniques. ...

Isolation of cloned cDNAs to auxin-responsive poly (A)+ RNAs of elongating soybean hypocotyl -
JC Walker, JL Key - Proceedings of the National Academy of Sciences of the …, 1982 - pubmedcentral.nih.gov
... Messenger RNA in Basal Sections and Intact Soybean Hypocotyl . ... [PubMed]; Silflow
CD, Hammett JR, Key JL. ... M. Polynucleotide sequences in eukaryotic DNA and RNA ...

Echinomycin binding sites on DNA -
MM Van Dyke, PB Dervan - Science, 1984 - sciencemag.org
... of 15 echinomycin sites on 210 base pairs of DNA, key recognition elements for
echinomycin are contained in the sequences (5'-3') ACGTand TCGT(A, adenine; C, ...

On the pairing rules for recognition in the minor groove of DNA by pyrrole-imidazole polyamides -
S White, EE Baird, PB Dervan - Chemistry & Biology, 1997 - actxdownload.chembiol.com
... base pair by the Im Py pairing requires precise positioning for the key hydrogen
bond ... 46: 20 f.tM, 10 pM, and 1 pM polyamide, respectively; lane 7, intact DNA. ...

Source: Google Scholar

Researchers solve first structure of a key to intact DNA inheritance

Bacteria, including S. aureas, use mechanism to spread antibiotic resistance

HOUSTON - Researchers have solved the structure of a DNA-protein complex that is crucial in the spread of antibiotic resistance among bacteria. Knowing this structure also provides fundamental insight into how cells successfully divide into two new cells with intact DNA

The report in the Dec. 20th issue of Nature focuses on how DNA separates and maintains its integrity when a cell divides. Using X-ray crystallography, the team led by structural biologists at The University of Texas M. D. Anderson, with colleagues at the University of Sydney, Australia, produced clear 3-D images of the structure that results when two proteins connect with a DNA site to "segregate" DNA during cell division.

"We solve structures to answer questions about how molecules carry out their biological functions. Without knowing the structure, you can't understand molecular mechanisms at a detailed level," says lead author Maria Schumacher, Ph.D., associate professor in M. D. Anderson's Department of Biochemistry and Molecular Biology.

In this case, Schumacher and colleagues answer a basic science question and flag a possible target for clinical attack on antibiotic-resistant Staphlococcus Aureas, a tenacious and often lethal staph infection.

"The plasmid segregation system we are working on, called pSK41, is found in S. aureus and confers resistance to multiple antibiotics, including the drug of last resort, vancomycin," Schumacher says. "Because the segregation systems are essential for the retention of these multidrug resistant plasmids, they represent wonderful drug targets."

Plasmids are additional strips or circles of DNA found in bacteria that provide the bacterium with some mechanism of defense - in this case, protection against antibiotics. Plasmids can be transferred from one type of bacteria to another through a number of mechanisms.

Plasmids are also a great model for understanding cell division and segregation, Schumacher says, because plasmid segregation is relatively simple: two proteins connect to one DNA site to launch the process. Cells divide to multiply and it's crucial for this split to go smoothly so each daughter cell ends up with the DNA it needs to function.

"If these plasmids don't divide and go to the next generation of cells, those bacteria cells lose their drug resistance," Schumacher notes.

In the Nature paper, the scientists capture the first structure ever solved of a segrosome complex that partitions and divides DNA.

A protein called ParR connects with a centromere DNA site, a round string of DNA repeats in the plasmid, to form the segrosome complex, which then completes itself by attracting filaments of another protein called ParM. The ParM filaments grow, literally pushing the two replicated plasmid segrosomes apart, resulting in two copies of the plasmid with intact DNA.

"An important question in segregation biology has been 'what structure does the segrosome adopt"' Our segrosome structure answers that question. We now have a molecular model for the segregation of DNA," Schumacher says.

Solving the structure is necessary to understand how these molecules function. "If we know these details we can design highly specific drugs to disrupt their actions," Schmacher notes.

The researchers used a technique called X-ray crystallography to discern the structure of both proteins connecting to the plasmid DNA. This technique first requires purification and crystallization of the protein or, in this case, the more challenging DNA-protein complex structure. These are usually the most difficult steps of the process.

Next, the crystal sample is mounted on a tiny loop in an X-ray diffractor and X-rays are beamed through it. Bending around the lattice of atoms in the crystal, the X-rays produce a diffraction pattern, which can be seen as a dot pattern on a monitor.

A state-of-the-art X-ray diffractor shoots a different angle of the crystallized protein every few minutes. Taking between 180-300 images will produce 100,000 to 300,000 data points.

Mathematical analysis of those points reveals a three-dimensional structure. The first image is an electron density map, which illustrates a protein's hills and valleys based on the position of the electrons of the atoms that compose the complex. This leads to the more exotic ribbon diagram, a spiraling, looping almost skeletal representation of the complex's crucial components.

###

The researchers used the Advanced Light Source (ALS) synchrotron at the U.S. Department of Energy's Lawrence Berkeley National Laboratory a fast, powerful diffractor that shoots a new diffraction pattern every half second, to solve this structure.

Co-authors with Schumacher are Tiffany Glover and Thomas Dunham, also of M. D. Anderson's Department of Biochemistry and Molecular biology; and Anthony J. Brzoska, Slade O. Hensen, Ronald Skurray and Neville Firth, all of the University of Sydney.

The research was supported by a Burroughs Wellcome Career Development Award, an M. D. Anderson Trust Fellowship, a National Institutes of Health grant, an Australian Research Council Grant and an Australian National Health and Medical Research Council Project grant.

 
 
 
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