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Public release date: 29-Jul-2007
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Contact: David Cameron
public_affairs@hms.harvard.edu
617-432-0442
Harvard Medical School

Risk genes for multiple sclerosis uncovered

BOSTON, Mass. (July 29, 2007)—A large-scale genomic study has uncovered new genetic variations associated with multiple sclerosis (MS), findings that suggest a possible link between MS and other autoimmune diseases. The study, led by an international consortium of clinical scientists and genomics experts, is the first comprehensive study investigating the genetic basis of MS. Findings appear in the July 29 online edition of the New England Journal of Medicine.

MS, a disease of the central nervous system whose symptoms range from mild muscle weakness to partial or complete paralysis, is widely considered an autoimmune disease, one that arises from a combination of genetic and environmental factors. This collusion of events leads the body to attack and destroy the insulation along nerve fibers. This study, which analyzed genomic information from 12,360 people, confirmed that immune system genes are altered in people diagnosed with MS, and pointed to potential mechanisms of the disease.

The researchers gathered 931 sets of DNA samples from MS patients and their parents. They analyzed single nucleotide polymorphisms (SNPs), that is, small differences in DNA sequence that represent the most common genetic variations between individuals, and looked for variations that were more commonly inherited by people with MS compared to samples from people without the disease. To double-check the findings, they performed a second analysis of other sets of families, individual cases of MS, and a control group. In the end, all the samples were combined for a final analysis of more than 12,000 subjects.

The only genetic link for MS previously identified using other techniques is in the major histocompatibility complex (MHC), a large cluster of genes responsible for many immune functions, including preventing the body’s immune cells from attacking its own tissues. This analysis confirmed that link but went further to find other variants in genetic regions that are more common in people with MS.

One of the regions contains a gene called the IL-2 receptor, which has also been linked to two other autoimmune diseases: type 1 diabetes and autoimmune thyroid disease.

“Scientists are increasingly finding genetic links between autoimmune diseases that affect different tissues in the body, including type one diabetes and rheumatoid arthritis,” says David Hafler, the Jack, Sadie and David Breakstone professor of neurology at Harvard Medical School and Brigham and Women’s Hospital, and one of the study’s authors. “This study will likely spur further research into the connection between these seemingly separate conditions.”

Another region harbors a gene called the IL-7 receptor, which helps to control the activity of a class of immune cells called regulatory T cells. Two papers appearing simultaneously in Nature Genetics confirm this finding, and explore how the change in the IL-7 receptor affects the immune system. “I believe that this receptor and its interaction with regulatory T cells will now become a major focus of research on MS,” says Stephen Hauser, professor of neurology at University of California San Francisco, and another author on the paper.

This latest paper is among a series of recent whole-genome association studies that have begun to uncover the genetic basis of complex diseases like diabetes, schizophrenia, and coronary artery disease. Unlike diseases caused by a mutation in a single gene, these conditions seem to arise from a combination of genetic, behavioral, and environmental factors. Scientists believe that a host of genetic variations may contribute to a person’s susceptibility. For instance, Hafler points out that in MS, “each gene contributes only a small amount of risk. The big question is, how do they interact with each other, and are they in common pathways"” If so, this can point scientists to the underlying cause of the disease, which may guide future treatments.

Genomic technologies have now made it possible to uncover these subtle genetic associations. “People have been looking for genes involved in MS for 30 years,” Hafler says. “Why weren’t they found" The answer is you couldn’t do it without the sequence of the human genome.” Collaboration with Eric Lander at the Broad Institute of Harvard and MIT, a leader in the effort to sequence the human genome, was critical. The next step, Hafler said, is to begin to collect larger numbers of samples and examine more DNA sequences, which will allow scientists to identify subtler variations that contribute to the disease.

“One of the most encouraging outcomes of this current genomic study,” says Dr. John Richert, Executive Vice President, Research & Clinical Programs, National MS Society, “is that it is helping us to pinpoint genes that may elevate the risk of developing MS and other autoimmune diseases, pointing the way to new areas of research and new therapeutic targets to both treat and eventually prevent these diseases.”

“This study illustrates the power of collaboration,” adds Adrian Ivinson, Director of the Harvard Center for Neurodegeneration and Repair and a coauthor on the paper. “Individually, none of us could have completed a study of this scale and complexity. But using a Collaborative Research Award from the National MS Society we formed a truly effective international consortium that was able to deliver the most exhaustive search for MS risk factors ever published. In an effort to see the work extended, we are now committed to making the entire data set available to MS researchers worldwide.”

“This is just the beginning,” says Hauser. “This international collaboration is currently planning even larger and more detailed explorations of the genetic landscape of MS.”

###

This work was supported by grants from the National Multiple Sclerosis Society, National Institutes of Health, the Nancy Davis Center Without Walls, and the Penates Foundation.

Written by Courtney Humphries

Additional contact information:

Broad Institute of Harvard and MIT
Nicole Davis
news@broad.mit.edu

University of California at San Francisco
Kristen Bole
kbole@pubaff.ucsf.edu
415.476.2743

University of Cambridge School of Clinical Medicine
Genevieve Maul
gm349@admin.cam.ac.uk
+44 (0) 1223 332300

University of Miami School of Medicine
Omar Montejo
omontejo@miami.edu
305.243.5654

Vanderbilt University
John Howser
john.howser@vanderbilt.edu
615.322.4747

Full citation:
New England Journal of Medicine, July 29, 2007; early online edition
“Risk Alleles for Multiple Sclerosis Identified by a Genomewide Study”

Lead investigators at each institution:

David A. Hafler, M.D. Brigham and Women’s Hospital, and Harvard Medical School, Boston MA; Alastair Compston, FMedSci, FRCP, Ph.D. University of Cambridge School of Clinical Medicine, Cambridge, United Kingdom; Eric S. Lander, Ph.D. Broad Institute of Harvard University and Massachusetts Institute of Technology, Cambridge, MA; Margaret A. Pericak-Vance, Ph.D. University of Miami School of Medicine, Miami, FL; Jonathan L. Haines, Ph.D. Vanderbilt University Medical Center, Nashville, TN; Stephen L. Hauser, M.D. University of California at San Francisco, San Francisco, CA

Harvard Medical School has more than 7,000 full-time faculty working in eight academic departments based at the School's Boston quadrangle or in one of 47 academic departments at 18 Harvard teaching hospitals and research institutes. Those Harvard hospitals and research institutions include Beth Israel Deaconess Medical Center, Brigham and Women's Hospital, Cambridge Health Alliance, The CBR Institute for Biomedical Research, Children's Hospital Boston, Dana-Farber Cancer Institute, Forsyth Institute, Harvard Pilgrim Health Care, Joslin Diabetes Center, Judge Baker Children's Center, Massachusetts Eye and Ear Infirmary, Massachusetts General Hospital, Massachusetts Mental Health Center, McLean Hospital, Mount Auburn Hospital, Schepens Eye Research Institute, Spaulding Rehabilitation Hospital, VA Boston Healthcare System.

Brigham and Women's Hospital (BWH) is a 747-bed nonprofit teaching affiliate of Harvard Medical School and a founding member of Partners HealthCare System, an integrated health care delivery network. BWH is committed to excellence in patient care with expertise in virtually every specialty of medicine and surgery. The BWH medical preeminence dates back to 1832, and today that rich history in clinical care is coupled with its national leadership in quality improvement and patient safety initiatives and its dedication to educating and training the next generation of health care professionals. Through investigation and discovery conducted at its Biomedical Research Institute (BRI), BWH is an international leader in basic, clinical and translational research on human diseases, involving more than 800 physician-investigators and renowned biomedical scientists and faculty supported by more than $400M in funding. BWH is also home to major landmark epidemiologic population studies, including the Nurses' and Physicians' Health Studies and the Women's Health Initiative. For more information about BWH, please visit www.brighamandwomens.org.

About the National Multiple Sclerosis Society: MS stops people from moving. We exist to make sure it doesn’t. The National MS Society addresses the challenges of each person affected by MS by funding cutting edge research, driving change through advocacy, facilitating professional education, collaborating with MS organizations around the world, and providing programs and services designed to help people with MS and their families move their lives forward. We are people who want to do something about MS NOW, and are dedicated to achieving a world free of MS. Join the movement at nationalMSsociety.org.

 
 
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 Contact: Richard Merritt
Merri006@mc.duke.edu
919-660-1309
Duke University Medical Center

First new multiple sclerosis gene found in 30 years

DURHAM, N.C. -- A newly identified gene may hold the promise of guiding future research into therapies for multiple sclerosis in what its discoverers say is the first major genetic advance in 30 years for understanding this nervous system disease.

While it has been known that there is a strong genetic underpinning for multiple sclerosis, only genes within a region of chromosome 6 have to date been implicated in the disease. The current finding, reported early online July 29 in the journal Nature Genetics, demonstrated that a functional gene variant on chromosome 5 was associated with an increased susceptibility to the disease. The study was supported by the National Institutes of Health

“Our finding is very important because the genetic factors that are already known to be associated with multiple sclerosis only explain less than half of the total genetic basis for the disease,” said Simon Gregory, Ph.D., molecular geneticist at Duke’s Center for Human Genetics and first author of the paper. “We have identified a gene that increases an individual’s risk of MS by 30 percent and that this variant has an effect on the function of the gene.”

It is likely that variants of many genes are associated with the development of multiple sclerosis, so identifying a novel gene that is associated with MS will be very helpful in understanding this complex disease.”

Joining Gregory and his colleagues at Duke were researchers from the University of California at San Francisco and the University of Cambridge in the United Kingdom, who spearheaded the collection of multiple sclerosis populations over many years, and the University of Miami and Vanderbilt University. The same team was also involved in another paper replicating similar findings from a whole genome analysis, which will appear on line in the New England Journal Medicine on July 29th.

Multiple sclerosis is a disease that is caused by the breakdown of the fatty sheath surrounding axons, the long spindly portions of nerve cells that carry messages from one cell to another. This sheath, known as myelin, acts much like the plastic coating insulating an electrical cord.

For reasons that are not well understood, the body’s own immune system is believed to attack the myelin, which can cause “short circuits” in the body’s electrical system. This leads to the symptoms of the disease, which include muscle weakness, cognitive impairment, difficulties with balance and coordination, and speech and vision problems. What triggers this autoimmune response is likely a result of a complex interplay between genetic and environmental factors, Gregory said.

The previously discovered multiple sclerosis genes were all located in an area of chromosome 6 involved in the major histocompatibility complex, which is important in the regulation of the immune system. The gene variation discovered in the most recent research is located on chromosome 5, and is involved in guiding the production of interleukin-7 receptor alpha (IL-7R), which is a critical receptor for the development and growth of key immune system cells.

Gregory said that as research builds upon the altered function of IL-7R the mechanisms involved in the development of multiple sclerosis will be unlocked, which may lead to novel treatments for the disease or the identification of targets for new therapies.

The team used a technique known as genomic convergence, in which they took the results of many studies looking for common elements. From studies involving patients and their families in the United States and Great Britain, they analyzed more than 7,000 DNA samples from patients with confirmed multiple sclerosis and those without the disease After winnowing down 28 candidate genes to the IL-7R gene, the researchers then tested their findings on a different set of patient populations to confirm their findings.

“One of the greatest challenges in any effort to identify genes for complex diseases like multiple sclerosis is to see if results from one study population can be confirmed in others” said Silke Schmidt, Ph.D., co-first author of the paper who is also at the Duke Center for Human Genetics. “We showed that the exact same genetic change in IL-7R increased the risk of multiple sclerosis to a very similar extent in four different populations.”

Multiple sclerosis is most common in young adults, with more than 90 percent of the cases being diagnosed before the age of 55, and fewer than five percent diagnosed before the age of five. Women are two to three times more likely to develop the disease, which afflicts about 350,000 patients in the United States.

Contact: Daniel Stimson
stimsond@ninds.nih.gov
301-496-5751
NIH/National Institute of Neurological Disorders and Stroke

After a decades-long search, scientists identify new genetic risk factors for multiple sclerosis

A pair of large-scale genetic studies supported by the National Institutes of Health has revealed two genes that influence the risk of getting multiple sclerosis (MS) – data sought since the discovery of the only other known MS susceptibility gene decades ago. The findings could shed new light on what causes MS – a puzzling mix of genes, environment and immunity – and on potential treatments for at least 350,000 Americans who have the disease.

"These studies describe the first genes conclusively linked to MS in more than 20 years," said Ursula Utz, Ph.D., a program director at the National Institute of Neurological Disorders and Stroke (NINDS), a part of NIH. “This breakthrough was made possible through persistence, an elegant search strategy, and genomic data and techniques that were not available until recently.”

Both studies involved scanning DNA samples from more than 20,000 MS patients and unaffected individuals in the U.S. and Europe, and looking for single nucleotide polymorphisms (SNPs), which are single-letter variations in a gene's DNA code. Published simultaneously today in the New England Journal of Medicine and Nature Genetics, the studies demonstrate an association between MS and SNPs in two genes that encode interleukin receptors, proteins that serve as antennae on the surface of immune cells.

Both studies were supported by NINDS and the National Multiple Sclerosis Society. The Nature Genetics study received additional support from the National Institute of General Medical Sciences (NIGMS). The NEJM study was also supported in part by the Penates Foundation.

They were conducted by overlapping teams of scientists that used different gene-hunting strategies. One team, which scanned the entire human genome for MS risk factors, was co-led by David Hafler, M.D., Professor of Neurology at Harvard Medical School and Brigham and Women's Hospital in Boston, Stephen Hauser, M.D., Professor and Chair of Neurology at the University of California in San Francisco, and Alastair Compston, FRCP, Ph.D., Head of the Department of Clinical Neurosciences at the University of Cambridge, U.K. The other team, which focused their search on a set of genes they considered potential risk factors for MS, was co-led by Jonathan Haines, Ph.D., Director of the Center for Human Genetics Research at Vanderbilt University Medical Center in Nashville, Tenn. and Margaret A. Pericak-Vance, Ph.D., Director of the Miami Institute for Human Genomics at the University of Miami. Drs. Hauser, Compston, Haines and Pericak-Vance participated in both studies.

MS typically causes limb weakness, vision loss and problems with coordination, and is the most common disabling neurological disorder of young adults. It's an autoimmune disease, occurring when the body's immune system mistakenly attacks a protective sheath around axons – the delicate cables that nerve cells use to connect with each other. Various immunosuppressant drugs can reduce symptoms and slow the disease's course, but most MS patients become increasingly disabled with time.

The trigger for MS is unclear, though there's strong evidence for an interplay between genetic susceptibility and some type of environmental factor. Having a relative, especially an identical twin, with MS increases one's risk of developing the disease. In the mid-1970s, researchers discovered that human leukocyte antigens (HLA) account for some of this genetic susceptibility. HLAs are proteins displayed on all the body's cells to help the immune system distinguish self from non-self. A variant of the HLA-DRB1 gene, now widely accepted as the strongest genetic risk factor for MS, increases the likelihood of getting the disease up to four-fold.

Still, HLA does not fully explain the genetic basis of MS; scientists have long realized that other genes must play a role that has been difficult to detect. Some studies have pointed to other HLA genes, but neither of the two genes reported today belong to that category. Both genes encode receptors on the surface of T cells – the immune system's mobile infantry – that enable the cells to respond to regulatory, secreted proteins called interleukins.

"These are the first non-HLA genes to be unequivocally associated with MS," said Dr. Pericak-Vance. "They give us a new way of looking at the biology of the disease, and could be targets for therapeutic development."

Both studies searched for a link between MS and SNPs that were previously identified by the HapMap, an NIH-supported project to catalog genetic differences in human populations.

In the genome-wide association study, the first of its kind in MS, the researchers used gene chip technology to scan more than 500,000 SNPs. In total, they analyzed more than 13,000 DNA samples, many of them collected and stored by the Center for Genetic Studies at the National Institute of Mental Health (NIMH) and the U.K.'s Wellcome Trust Case Control Consortium. In the candidate gene study, the researchers scanned DNA samples from four large groups in the U.S, U.K. and Belgium, totaling more than 10,000 people.

Both studies revealed an association between MS and a single SNP in the gene interleukin 7 receptor-alpha (IL7R-alpha). The genome-wide scan also found two SNPs in the gene for interleukin 2 receptor-alpha (IL2R-alpha) associated with the disease. Both receptors are known to influence the way that T cells patrol the body for pathogens. IL2R-alpha has previously been implicated in other autoimmune diseases, including type 1 diabetes.

Each of the SNPs associated with MS appears to increase the risk of developing the disease by about 20 to 30 percent. Although that number might seem small, "it's the size of effect we expect to see for genes outside of HLA," said Dr. Haines. Multiple genetic variations, each carrying a small risk of MS, could combine with one another and with environmental factors to create a large risk, he said.

The researchers who conducted the candidate gene search also think they know how variation in the IL7R-alpha gene affects the IL7R-alpha protein. They found evidence that the MS-associated variant causes a reduction in the amount of the IL7R-alpha protein at the T cell surface. Less is known about how variation in IL2R-alpha might contribute to MS, but that protein is already being viewed as useful therapeutic target. In a 2004 study by NINDS scientists, 10 MS patients who were unresponsive to currently approved therapies showed improvement when treated with an antibody that blocks IL2R-alpha, developed to prevent rejection of organ transplants.

Finally, the genome-wide scan identified nearly a dozen other genes that could represent risk factors for MS. Some of the associations were relatively weak and some of the genes' functions are unclear.

"A major effort to understand the full complement of genes involved in MS will be necessary to completely understand the disease," said Dr. Hafler, adding that all of the data from the genome scan will be made publicly available for future investigations.

###

NINDS (www.ninds.nih.gov) is a component of the National Institutes of Health (NIH), and is the nation’s primary supporter of biomedical research on the brain and nervous system.

The National Institutes of Health (NIH) — The Nation's Medical Research Agency — includes 27 Institutes and Centers and is a component of the U.S. Department of Health and Human Services. It is the primary federal agency for conducting and supporting basic, clinical and translational medical research, and it investigates the causes, treatments, and cures for both common and rare diseases. For more information about NIH and its programs, visit www.nih.gov.

References:

The International Multiple Sclerosis Genetics Consortium. "Novel Risk Alleles for Multiple Sclerosis Identified by a Whole Genome Association Study."
New England Journal of Medicine, published online July 29, 2007.

Gregory SG et al. "Allelic and Functional Association of the Interleukin 7 Receptor alpha Chain (IL7R-alpha) with Multiple Sclerosis."
Nature Genetics, published online July 29, 2007.

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